COMPUTER-IMPLEMENTED BIOLOGICAL SEQUENCE IDENTIFIER SYSTEM AND METHOD

Patent №

US 7,979,446

Granted

2011-07-12

Filed 2009

Owner

THE GOVERNMENT OF THE UNITED STATES, AS RESPRESENTED BY THE SECRETARY OF THE NAVY

Lab

AI components

1

kr

Assignment

Recorded

Dataset

AIPD

2023_r1 edition

Application

12617025

A method of: submitting reference sequences to a taxonomic database to produce taxonomic results; and reporting a taxonomic identification based on the taxonomic results. The reference sequences are the output of genetic database queries that return a score for each reference sequence. A method for processing a biological sequence obtained from an assay by: converting base calls located in a predetermined list of positions within the biological sequence to N; and determining the ratio of single nucleotide polymorphisms in the biological sequence relative to a reference sequence. Each entry in the predetermined list of positions represents the capability of a substance hybridizing to a microarray used to generate the biological sequence. The substance is not the nucleic acid of a target pathogen.

Knowledge representationG16B 20/20G16B 30/00G16B 30/10G16B 20/00G16B 25/00Y10S 707/99936

AI classification

Knowledge representation0.55
Natural language0.04
Machine learning0.03
AI hardware0.01
Vision0.00
Planning0.00
Evolutionary computation0.00
Speech0.00

Ownership

THE GOVERNMENT OF THE UNITED STATES, AS RESPRESENTED BY THE SECRETARY OF THE NAVY

assignment · 235070309

Assignors

LIN, BAOCHUAN, MALANOSKI, ANTHONY P, SCHNUR, JOEL M, STENGER, DAVID A

On an employer assignment, the assignors are typically the inventors.

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